Neotask connects to Synapse.org so research teams can access open biomedical datasets, manage projects, and collaborate on data-driven science through natural conversation.
Browse and access open biomedical research datasets and projects hosted on the Synapse platform
Manage files, tables, and project structures for collaborative scientific data sharing
Automate data retrieval and project management workflows for large-scale biomedical research
What You Can Do
Synapse through Neotask provides five core research data operations:
Area
Actions
What They Do
Projects
Get project, list projects
Browse collaborative research projects and retrieve project metadata
Files
Get file, list files
Access and list files within any Synapse project or folder
Tables
Query table
Run SQL-like queries against Synapse data tables
Every action runs autonomously or requires your approval - you decide.
Try Asking
"List all files in the TCGA Breast Cancer project on Synapse"
"Query the clinical data table in the ADNI project for patients over 70 with MCI"
"What projects are available in the Sage Bionetworks collections?"
"Get the metadata for the genomic data file in the NCI GDC project"
"List all the data tables in the Alzheimer's Disease Knowledge Portal"
Pro Tips
Use table queries to filter large clinical datasets before downloading - agents can apply inclusion/exclusion criteria programmatically, saving significant compute time.
Multi-agent teams can access data from multiple Synapse projects simultaneously to support cross-cohort analyses.
Combine Synapse data retrieval with PubMed searches in an app group so agents gather both the data and the literature context in one workflow.
Schedule data availability checks through automations so your team is notified when new datasets are added to projects you follow.
Multiple workspaces and capacity for larger teams.
Works Well With
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